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Ala_g10209 (VPS28-2, VPS28-1)


Aliases : VPS28-2, VPS28-1

Description : component *(VPS28) of ESCRT-I complex & original description: none


Gene families : OG0005158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g10209

Target Alias Description ECC score Gene Family Method Actions
AT4G21560 VPS28-1 vacuolar protein sorting-associated protein 28 homolog 1 0.03 OrthoFinder output from all 47 species
Cre16.g678100 VPS28-2, VPS28-1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Mp8g04540.1 VPS28-2, VPS28-1 component VPS28 of ESCRT-I complex 0.02 OrthoFinder output from all 47 species
Pnu_g14051 VPS28-1 component *(VPS28) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEA Interproscan
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR007143 Vps28 22 206
No external refs found!