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  5. Ala_g10009

Ala_g10009


Description : not classified & original description: none


Gene families : OG0008235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008235_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g10009
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Adi_g087876 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32216 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g37822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23143 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g03871 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g24088 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g42443 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16793 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26923 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 252 322
IPR000225 Armadillo 516 553
IPR000225 Armadillo 558 596
No external refs found!