1. Home
  2. Species
  3. Adiantum latifolium
  4. Sequence
  5. Ala_g09240

Ala_g09240


Description : TruB-type tRNA pseudouridine synthase & original description: none


Gene families : OG0003765 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003765_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g09240

Target Alias Description ECC score Gene Family Method Actions
AT5G14460 No alias Pseudouridine synthase family protein 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021428.25 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01032383001 No alias RNA processing.RNA... 0.03 OrthoFinder output from all 47 species
Pir_g02810 No alias TruB-type tRNA pseudouridine synthase & original... 0.03 OrthoFinder output from all 47 species
Sam_g26745 No alias TruB-type tRNA pseudouridine synthase & original... 0.02 OrthoFinder output from all 47 species
Smo75554 No alias RNA processing.RNA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002501 PsdUridine_synth_N 346 496
IPR032819 TruB_C 497 539
No external refs found!