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  5. Ala_g09024

Ala_g09024


Description : not classified & original description: none


Gene families : OG0000708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000708_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g09024
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT1G24300 No alias GYF domain-containing protein 0.08 OrthoFinder output from all 47 species
AT1G27430 No alias GYF domain-containing protein 0.07 OrthoFinder output from all 47 species
Adi_g055823 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g086400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48838 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37682 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14645 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22450 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17703 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08149 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g70568 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0013.g013373 No alias susceptibility factor *(EXA1) & original description: CDS=1-3141 0.03 OrthoFinder output from all 47 species
Azfi_s0448.g070692 No alias susceptibility factor *(EXA1) & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.18G008600.1 Ceric.18G008600 susceptibility factor *(EXA1) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G048100.1 Ceric.18G048100 susceptibility factor *(EXA1) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.33G057600.1 Ceric.33G057600 susceptibility factor *(EXA1) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.56 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre04.g225350 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g05846 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39021 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22181 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15753 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000921001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01000922001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01009695001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01033051001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os01g69990.1 LOC_Os01g69990 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g14158 No alias susceptibility factor *(EXA1) & original description: none 0.07 OrthoFinder output from all 47 species
Len_g20603 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04295 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07445 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g16227 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
MA_10117g0030 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_10117g0040 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10425836g0010 No alias susceptibility factor (EXA1) 0.07 OrthoFinder output from all 47 species
MA_10425836g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g07340.1 No alias susceptibility factor (EXA1) 0.03 OrthoFinder output from all 47 species
Msp_g20541 No alias susceptibility factor *(EXA1) & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g44868 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03874 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06775 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g16118 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g23458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c12_13780V3.1 Pp3c12_13780 GYF domain-containing protein 0.01 OrthoFinder output from all 47 species
Ppi_g46347 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54992 No alias susceptibility factor *(EXA1) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014813 No alias susceptibility factor *(EXA1) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024075 No alias susceptibility factor *(EXA1) & original description: CDS=1-5616 0.04 OrthoFinder output from all 47 species
Sam_g11581 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24517 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29247 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo438556 No alias No description available 0.05 OrthoFinder output from all 47 species
Smo438614 No alias No description available 0.07 OrthoFinder output from all 47 species
Solyc05g015920.3.1 Solyc05g015920 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g30700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08422 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028423_P003 Zm00001e028423 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e028424_P001 Zm00001e028424 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e032780_P001 Zm00001e032780 susceptibility factor (EXA1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017070 U6 snRNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003169 GYF 636 680
No external refs found!