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  5. Ala_g08605

Ala_g08605


Description : component *(cL38) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0010159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g08605
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00126850 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Ceric.28G032900.1 PSRP6, Ceric.28G032900 component *(cL38) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Gb_06980 PSRP6 component psPSRP6 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
LOC_Os11g34940.1 PSRP6, LOC_Os11g34940 component psPSRP6 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Len_g10215 PSRP6 component *(cL38) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
MA_232471g0010 PSRP6 component psPSRP6 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Mp4g21280.1 No alias component psPSRP6 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Pir_g08844 No alias component *(cL38) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012779 PSRP6 component *(cL38) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc04g077130.1.1 PSRP6, Solyc04g077130 component psPSRP6 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!