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  5. Ala_g08496

Ala_g08496


Description : not classified & original description: none


Gene families : OG0004219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g08496

Target Alias Description ECC score Gene Family Method Actions
AT3G61480 No alias Quinoprotein amine dehydrogenase, beta chain-like;... 0.04 OrthoFinder output from all 47 species
Adi_g021989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01179 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g00813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G054900.1 Ceric.07G054900 not classified & original description: pacid=50626774... 0.13 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.3 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g506650 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g14638 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g12810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026995001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g54500.1 LOC_Os02g54500 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g06750 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_10432719g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_306795g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_72005g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g05920.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Nbi_g05457 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g11827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo75259 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g094880.3.1 Solyc01g094880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023736_P002 Zm00001e023736 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR009771 Ribosome_control_1 678 932
No external refs found!