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  5. Ala_g08370

Ala_g08370 (HRE2)


Aliases : HRE2

Description : transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g08370
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00115p00032780 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AT1G19210 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.03 OrthoFinder output from all 47 species
AT1G74930 ORA47 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G34410 RRTF1 redox responsive transcription factor 1 0.03 OrthoFinder output from all 47 species
Adi_g016417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022277 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42330 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04224 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0096.g043715 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g10613 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.03G067500.1 AtERF48, DREB2C,... subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G005300.1 RAP2.12, Ceric.10G005300 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.24G073300.1 ERF72, EBP,... transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dac_g26333 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07677 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Dde_g01348 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Dde_g09777 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18593 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Ehy_g00325 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g00819 ERF1, ATERF1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29769 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Gb_17008 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_36010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g06330.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g54160.2 RAP2.2, LOC_Os02g54160 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g09390.1 RAP2.12, LOC_Os06g09390 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g40150.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
LOC_Os08g36920.1 RRTF1, LOC_Os08g36920 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Len_g35061 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_15000g0010 No alias Ethylene-responsive transcription factor ERF017... 0.02 OrthoFinder output from all 47 species
MA_166248g0020 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_168025g0010 ERF110 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_40338g0010 DREB26 Ethylene-responsive transcription factor ERF012... 0.02 OrthoFinder output from all 47 species
MA_69434g0020 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Ore_g43707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26646 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pnu_g33487 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g55442 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ppi_g63080 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g108240.3.1 RRTF1, Solyc01g108240 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g026270.3.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.02 OrthoFinder output from all 47 species
Solyc03g124110.2.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.04 OrthoFinder output from all 47 species
Solyc04g054910.4.1 Solyc04g054910 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc06g068360.3.1 Solyc06g068360 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc07g053740.1.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc08g078190.2.1 ERF5, ATERF-5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc09g089920.1.1 Solyc09g089920 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g006130.1.1 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc10g050960.3.1 RRTF1, Solyc10g050960 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g050970.1.1 RRTF1, Solyc10g050970 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc10g076380.2.1 DREB19, Solyc10g076380 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Spa_g04539 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Spa_g09063 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g12974 ORA47 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15105 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g22026 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g46619 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g10351 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g30387 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e003800_P001 RRTF1, Zm00001e003800 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e006604_P001 ERF7, ATERF7,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e009947_P001 RRTF1, Zm00001e009947 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e010933_P001 PUCHI, Zm00001e010933 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e014415_P001 TINY2, Zm00001e014415 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e036130_P001 RAP2.4, Zm00001e036130 transcription factor (DREB) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 76 125
No external refs found!