Aliases : SIGB, SIG2, SIGA, SIG1, RPOD1
Description : basal Sigma-type transcription factor & original description: none
Gene families : OG0000565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000565_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Dde_g18194 | ATSIG1, SIGB,... | basal Sigma-type transcription factor & original... | 0.09 | OrthoFinder output from all 47 species | |
Ehy_g04026 | SIGB, SIG2,... | basal Sigma-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g13016 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g12897 | SIGB, SIG2,... | basal Sigma-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g13485 | No alias | basal Sigma-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g19255 | No alias | basal Sigma-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g38609 | No alias | basal Sigma-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g12918 | ATSIG1, SIGB,... | basal Sigma-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006352 | DNA-templated transcription initiation | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
MF | GO:0035673 | oligopeptide transmembrane transporter activity | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
MF | GO:0042887 | amide transmembrane transporter activity | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:1904680 | peptide transmembrane transporter activity | IEP | HCCA |
No external refs found! |