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  5. Ala_g07965

Ala_g07965


Description : E3 ubiquitin ligase *(AIRP1) & original description: none


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07965
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT5G40590 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
Aev_g30265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g31280.1 LOC_Os08g31280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g073890.3.1 Solyc01g073890 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 323 365
IPR004146 DC1 126 171
IPR004146 DC1 72 116
IPR004146 DC1 181 229
IPR004146 DC1 19 62
No external refs found!