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  5. Ala_g07518

Ala_g07518 (PDS3, PDS, PDE226)


Aliases : PDS3, PDS, PDE226

Description : not classified & original description: none


Gene families : OG0002839 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07518

Target Alias Description ECC score Gene Family Method Actions
Adi_g022517 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g19316 PDS3, PDS, PDE226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03808 PDS3, PDS, PDE226 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene35673.t1 PDS3, PDS,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g26743 PDS3, PDS, PDE226 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.18G017400.1 PDS3, PDS,... not classified & original description: pacid=50621794... 0.05 OrthoFinder output from all 47 species
Ceric.25G032300.1 Ceric.25G032300 not classified & original description: pacid=50594452... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000655.47 TZ, THI4, THI1 No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001302.9 PDE181, ZDS, SPC1 No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020734.51 No alias 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.04 OrthoFinder output from all 47 species
Cre13.g587500 No alias Phytoene dehydrogenase, chloroplastic/chromoplastic... 0.01 OrthoFinder output from all 47 species
Dac_g13672 PDS3, PDS, PDE226 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g09245 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g01530 PDS3, PDS, PDE226 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05913 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023990001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os04g47290.2 LOC_Os04g47290 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g13429 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g06016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g34904 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428599g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_580945g0010 LDL3 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g18160.1 PDS3, PDS, PDE226 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g10094 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03292 PDS3, PDS, PDE226 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g56449 PDS3, PDS, PDE226 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g05186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo74261 PDS3, PDS, PDE226 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.03 OrthoFinder output from all 47 species
Spa_g29749 PDS3, PDS, PDE226 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g13831 PDS3, PDS, PDE226 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e007260_P002 Zm00001e007260 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 63 503
No external refs found!