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  5. Ala_g07273

Ala_g07273 (SAMDC)


Aliases : SAMDC

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07273

Target Alias Description ECC score Gene Family Method Actions
AT3G25570 No alias Adenosylmethionine decarboxylase family protein 0.03 OrthoFinder output from all 47 species
Dcu_g07454 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_123449g0010 No alias S-adenosyl methionine decarboxylase 0.02 OrthoFinder output from all 47 species
Mp7g18100.1 No alias S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Msp_g27068 No alias EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32435 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18523 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22755 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g080380.4.1 SAMDC4, BUD2,... S-adenosyl methionine decarboxylase 0.04 OrthoFinder output from all 47 species
Solyc03g098310.1.1 Solyc03g098310 ornithine decarboxylase 0.02 OrthoFinder output from all 47 species
Spa_g50329 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00861 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEA Interproscan
BP GO:0006597 spermine biosynthetic process IEA Interproscan
BP GO:0008295 spermidine biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001985 S-AdoMet_decarboxylase 5 330
No external refs found!