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  5. Ala_g07174

Ala_g07174 (NUA, AtTPR)


Aliases : NUA, AtTPR

Description : nucleoporin of nuclear pore complex *(NUA) & original description: none


Gene families : OG0003960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003960_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g07174
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00124730 NUA, AtTPR,... Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
AT1G79280 NUA, AtTPR nuclear pore anchor 0.08 OrthoFinder output from all 47 species
Adi_g055513 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.06 OrthoFinder output from all 47 species
Aev_g02612 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.06 OrthoFinder output from all 47 species
Als_g57232 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.05 OrthoFinder output from all 47 species
Aob_g26121 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.08 OrthoFinder output from all 47 species
Aop_g09061 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.05 OrthoFinder output from all 47 species
Cba_g20856 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g33695 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.05 OrthoFinder output from all 47 species
Ceric.23G046200.1 NUA, AtTPR,... nucleoporin of nuclear pore complex *(NUA) & original... 0.12 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000404.46 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
Dac_g14678 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g03218 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.07 OrthoFinder output from all 47 species
Dde_g09517 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.06 OrthoFinder output from all 47 species
Ehy_g15153 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01036698001 NUA, AtTPR Protein translocation.nucleus.nucleocytoplasmic... 0.09 OrthoFinder output from all 47 species
Gb_36757 NUA, AtTPR NUA nucleoporin of nuclear pore complex 0.06 OrthoFinder output from all 47 species
LOC_Os02g50790.2 LOC_Os02g50790 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g50799.1 NUA, AtTPR,... NUA nucleoporin of nuclear pore complex 0.05 OrthoFinder output from all 47 species
Len_g13910 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.09 OrthoFinder output from all 47 species
Lfl_g03520 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.11 OrthoFinder output from all 47 species
MA_10287420g0010 NUA, AtTPR no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435343g0040 NUA, AtTPR NUA nucleoporin of nuclear pore complex 0.06 OrthoFinder output from all 47 species
MA_109011g0010 NUA, AtTPR NUA nucleoporin of nuclear pore complex 0.05 OrthoFinder output from all 47 species
MA_113769g0010 NUA, AtTPR no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_33097g0010 NUA, AtTPR Nuclear-pore anchor OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp2g14600.1 NUA, AtTPR NUA nucleoporin of nuclear pore complex 0.05 OrthoFinder output from all 47 species
Msp_g15712 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.07 OrthoFinder output from all 47 species
Pir_g20507 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g44472 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.07 OrthoFinder output from all 47 species
Sam_g18065 No alias nucleoporin of nuclear pore complex *(NUA) & original... 0.04 OrthoFinder output from all 47 species
Smo444132 NUA, AtTPR Protein translocation.nucleus.nucleocytoplasmic... 0.08 OrthoFinder output from all 47 species
Solyc06g053570.2.1 NUA, AtTPR,... NUA nucleoporin of nuclear pore complex 0.12 OrthoFinder output from all 47 species
Spa_g10543 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.08 OrthoFinder output from all 47 species
Tin_g12694 NUA, AtTPR nucleoporin of nuclear pore complex *(NUA) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e023916_P004 NUA, AtTPR,... NUA nucleoporin of nuclear pore complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR012929 TPR/MLP1 1066 1191
No external refs found!