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  5. Lfl_g00688

Lfl_g00688


Description : thylakoid biogenesis factor *(CPSFL1) & original description: none


Gene families : OG0007567 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007567_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g00688
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00076490 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aop_g06397 No alias thylakoid biogenesis factor *(CPSFL1) & original... 0.05 OrthoFinder output from all 47 species
Ceric.14G022200.1 Ceric.14G022200 thylakoid biogenesis factor *(CPSFL1) & original... 0.03 OrthoFinder output from all 47 species
Cre10.g448051 No alias No description available 0.01 OrthoFinder output from all 47 species
Ehy_g03686 No alias thylakoid biogenesis factor *(CPSFL1) & original... 0.05 OrthoFinder output from all 47 species
Mp4g01620.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s3027.g028578 No alias thylakoid biogenesis factor *(CPSFL1) & original... 0.03 OrthoFinder output from all 47 species
Spa_g07146 No alias thylakoid biogenesis factor *(CPSFL1) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e036695_P001 Zm00001e036695 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0003333 amino acid transmembrane transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 154 277
No external refs found!