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  5. Ala_g06747

Ala_g06747


Description : amino acid transporter *(LHT) & original description: none


Gene families : OG0000789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g06747
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Aop_g30187 LHT1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15300 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31675 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12864 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22419 LHT2, AATL2, ATLHT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26545 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010331001 LHT1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
MA_126371g0010 LHT1 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Solyc04g011590.3.1 LHT1, Solyc04g011590 amino acid transporter (LHT) 0.02 OrthoFinder output from all 47 species
Tin_g08624 LHT1 amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19622 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029256_P001 LHT1, Zm00001e029256 amino acid transporter (LHT) 0.02 OrthoFinder output from all 47 species
Zm00001e029257_P002 LHT1, Zm00001e029257 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 42 437
No external refs found!