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  4. Sequence
  5. Ala_g06670

Ala_g06670


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g06670
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Adi_g001599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022798 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g060978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07932 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g15037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14219 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene09118.t1 Aspi01Gene09118 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14009.t1 Aspi01Gene14009 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27180.t1 Aspi01Gene27180 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30974.t1 Aspi01Gene30974 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G129400.1 Ceric.01G129400 not classified & original description: pacid=50592696... 0.05 OrthoFinder output from all 47 species
Ceric.11G073500.1 Ceric.11G073500 not classified & original description: pacid=50594821... 0.07 OrthoFinder output from all 47 species
Dac_g10245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12508 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g16047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.03 OrthoFinder output from all 47 species
Len_g10339 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g16358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g49393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11033 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp1g14410.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g13161 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g04165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09343 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g07388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08117 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g19047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 28 160
IPR002934 Polymerase_NTP_transf_dom 551 585
No external refs found!