Lfl_g00646


Description : small subunit of methylthioalkylmalate isomerase & original description: none


Gene families : OG0004189 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004189_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g00646
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00192160 evm_27.TU.AmTr_v1... 3-isopropylmalate dehydratase small subunit 3... 0.03 OrthoFinder output from all 47 species
AT2G43090 No alias Aconitase/3-isopropylmalate dehydratase protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009113 purine nucleobase biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000573 AconitaseA/IPMdHydase_ssu_swvl 137 188
No external refs found!