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  5. Ala_g06025

Ala_g06025


Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g06025
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Adi_g021138 ROC3 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11313 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13234 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06521.t2 ROC1, Aspi01Gene06521 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60489.t1 ROC2, Aspi01Gene60489 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08725 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G091900.1 Ceric.01G091900 EC_5.2 cis-trans-isomerase & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.21G017200.1 Ceric.21G017200 EC_5.2 cis-trans-isomerase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g10578 No alias EC_5.2 cis-trans-isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06988 No alias EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g00426 ROC2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03198 No alias EC_5.2 cis-trans-isomerase & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021249 No alias EC_5.2 cis-trans-isomerase & original description: CDS=10-2358 0.03 OrthoFinder output from all 47 species
Spa_g41136 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 29 192
No external refs found!