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  5. Ala_g04795

Ala_g04795 (ATSRL1)


Aliases : ATSRL1

Description : not classified & original description: none


Gene families : OG0003543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g04795
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Aob_g05835 ATSRL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32915 ATSRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026312001 ATSRL1 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
MpVg00250.1 ATSRL1 No annotation 0.02 OrthoFinder output from all 47 species
Pir_g20398 ATSRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g014560.4.1 ATSRL1, Solyc04g014560 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g19184 ATSRL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR024767 PRP38_C 191 269
IPR005037 PRP38 11 161
No external refs found!