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  5. Ala_g04215

Ala_g04215


Description : not classified & original description: none


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g04215

Target Alias Description ECC score Gene Family Method Actions
AT5G67385 No alias Phototropic-responsive NPH3 family protein 0.05 OrthoFinder output from all 47 species
Aspi01Gene11853.t1 Aspi01Gene11853 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042710 No alias not classified & original description: CDS=300-2192 0.03 OrthoFinder output from all 47 species
Ceric.33G050400.1 Ceric.33G050400 not classified & original description: pacid=50606641... 0.03 OrthoFinder output from all 47 species
Msp_g13285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g064720.3.1 Solyc02g064720 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc02g092560.3.1 Solyc02g092560 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 220 502
IPR000210 BTB/POZ_dom 35 123
No external refs found!