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  5. Ala_g03819

Ala_g03819


Description : microtubule assembly factor *(TCS1) & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g03819

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00035p00234670 evm_27.TU.AmTr_v1... Filament-like plant protein 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00204p00028740 evm_27.TU.AmTr_v1... Filament-like plant protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G19835 No alias Plant protein of unknown function (DUF869) 0.03 OrthoFinder output from all 47 species
AT1G47900 No alias Plant protein of unknown function (DUF869) 0.03 OrthoFinder output from all 47 species
AT2G23360 No alias Plant protein of unknown function (DUF869) 0.02 OrthoFinder output from all 47 species
AT3G19370 No alias Plant protein of unknown function (DUF869) 0.03 OrthoFinder output from all 47 species
Adi_g086888 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20778 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14384 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15283 No alias microtubule assembly factor *(TCS1) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g02379 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31008 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08748 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13596 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09288.t1 Aspi01Gene09288 recruiting factor *(VETH) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000164 No alias microtubule assembly factor *(TCS1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g036018 No alias not classified & original description: CDS=198-3077 0.02 OrthoFinder output from all 47 species
Cba_g31248 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G040100.1 Ceric.21G040100 microtubule assembly factor *(TCS1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.27G014900.1 Ceric.27G014900 not classified & original description: pacid=50605858... 0.04 OrthoFinder output from all 47 species
Ceric.31G007400.1 Ceric.31G007400 not classified & original description: pacid=50573664... 0.04 OrthoFinder output from all 47 species
Dac_g20369 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21457 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23963 No alias microtubule assembly factor *(TCS1) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g27142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022086001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031711001 No alias Filament-like plant protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os10g07480.1 LOC_Os10g07480 Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g01914 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g14154 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14363 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11370 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436435g0010 No alias Exocyst complex recruiting factor (VETH) 0.03 OrthoFinder output from all 47 species
MA_10437232g0030 No alias Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g20920.1 No alias Exocyst complex recruiting factor (VETH) 0.03 OrthoFinder output from all 47 species
Nbi_g05902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36333 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02317 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11825 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12619 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07064 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09434 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08462 No alias recruiting factor *(VETH) of Exocyst complex & original... 0.05 OrthoFinder output from all 47 species
Ppi_g30136 No alias microtubule assembly factor *(TCS1) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32112 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014695 No alias not classified & original description: CDS=889-4410 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020062 No alias not classified & original description: CDS=1-3423 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021755 No alias not classified & original description: CDS=1227-4859 0.02 OrthoFinder output from all 47 species
Solyc01g107890.3.1 Solyc01g107890 Filament-like plant protein 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc06g060320.4.1 Solyc06g060320 Exocyst complex recruiting factor (VETH) 0.03 OrthoFinder output from all 47 species
Spa_g09435 No alias microtubule assembly factor *(TCS1) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g15316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49138 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR008587 FPP_plant 82 1007
No external refs found!