Ala_g03130


Description : component *(uL24c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0006569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006569_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g03130

Target Alias Description ECC score Gene Family Method Actions
AT5G54600 No alias Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Als_g04734 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g00183 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aspi01Gene42449.t1 Aspi01Gene42449 component *(uL24c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ehy_g22263 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Len_g05147 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Lfl_g05272 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_10018366g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g07850.1 No alias component psRPL24 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Msp_g18519 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ore_g05626 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016787 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sam_g08486 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g08487 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc07g063960.3.1 Solyc07g063960 component psRPL24 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Spa_g00224 No alias component *(uL24c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e013043_P001 Zm00001e013043 component psRPL24 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003256 Ribosomal_L24 112 175
IPR005824 KOW 79 110
No external refs found!