Ala_g02976


Description : component *(uS6c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0003772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003772_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02976

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00220150 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT1G64510 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.04 OrthoFinder output from all 47 species
Adi_g014301 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Adi_g019564 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Als_g19098 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Aob_g08781 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Aop_g30964 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Aspi01Gene23973.t1 Aspi01Gene23973 component *(uS6c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031290 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Cba_g09290 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cba_g26011 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Ceric.32G022300.1 Ceric.32G022300 component *(uS6c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cre12.g520600 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Dac_g02644 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Dcu_g40728 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Dde_g06910 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Ehy_g04427 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01019593001 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
LOC_Os03g62630.1 LOC_Os03g62630 component psRPS6 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Len_g38836 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Lfl_g06876 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_10429326g0010 No alias component psRPS6 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Mp4g07210.1 No alias component psRPS6 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Msp_g00928 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Nbi_g25871 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Ore_g08524 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pir_g00320 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Pnu_g10315 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ppi_g06171 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009778 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sam_g19470 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc08g082690.2.1 Solyc08g082690 component psRPS6 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Spa_g37875 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Tin_g06363 No alias component *(uS6c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 109 206
No external refs found!