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  5. Ala_g02730

Ala_g02730


Description : scaffold component *(FRY) of RAM signalling pathway & original description: none


Gene families : OG0004160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02730

Target Alias Description ECC score Gene Family Method Actions
AT5G15680 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g059761 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.04 OrthoFinder output from all 47 species
Als_g03907 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.04 OrthoFinder output from all 47 species
Aob_g31248 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.03 OrthoFinder output from all 47 species
Dcu_g04159 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.04 OrthoFinder output from all 47 species
Dde_g12439 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.04 OrthoFinder output from all 47 species
Ehy_g24660 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.04 OrthoFinder output from all 47 species
GSVIVT01036514001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_24208 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g58410.1 LOC_Os02g58410 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g30743 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.03 OrthoFinder output from all 47 species
MA_10435894g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10436406g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g14653 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.03 OrthoFinder output from all 47 species
Nbi_g13508 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.02 OrthoFinder output from all 47 species
Ore_g25800 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015028 No alias scaffold component *(FRY) of RAM signalling pathway &... 0.06 OrthoFinder output from all 47 species
Smo84835 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc02g089370.2.1 Solyc02g089370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025481 Cell_Morphogen_C 1801 2081
IPR029473 MOR2-PAG1_mid 670 1776
IPR025614 Cell_morpho_N 87 631
No external refs found!