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  5. Ala_g02481

Ala_g02481 (VAN3, SFC, AGD3)


Aliases : VAN3, SFC, AGD3

Description : class I ARF-GAP ARF-GTPase-activating protein & original description: none


Gene families : OG0002309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02481
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AT5G61980 AGD1 ARF-GAP domain 1 0.03 OrthoFinder output from all 47 species
Adi_g058541 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.04 OrthoFinder output from all 47 species
Als_g03857 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.07 OrthoFinder output from all 47 species
Als_g15619 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.04 OrthoFinder output from all 47 species
Aob_g03552 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G018700.1 VAN3, SFC, AGD3,... class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z303500.1 VAN3, SFC, AGD3,... not classified & original description: pacid=50569325... 0.03 OrthoFinder output from all 47 species
Dac_g11184 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11040 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.05 OrthoFinder output from all 47 species
Ehy_g06174 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Ehy_g23167 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.04 OrthoFinder output from all 47 species
LOC_Os02g42134.2 AGD2, LOC_Os02g42134 class I ARF-GAP ARF-GTPase-activating protein 0.04 OrthoFinder output from all 47 species
Len_g14712 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.02 OrthoFinder output from all 47 species
Lfl_g11485 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.04 OrthoFinder output from all 47 species
Msp_g13257 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Msp_g28107 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.04 OrthoFinder output from all 47 species
Nbi_g04964 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Nbi_g05883 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.04 OrthoFinder output from all 47 species
Pir_g02000 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.04 OrthoFinder output from all 47 species
Smo232336 VAN3, SFC, AGD3 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc04g008660.4.1 AGD2, Solyc04g008660 class I ARF-GAP ARF-GTPase-activating protein 0.04 OrthoFinder output from all 47 species
Spa_g56823 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.04 OrthoFinder output from all 47 species
Zm00001e023047_P001 AGD2, Zm00001e023047 ADP-ribosylation factor GTPase-activating protein AGD2... 0.03 OrthoFinder output from all 47 species
Zm00001e034659_P002 VAN3, SFC, AGD3,... class I ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001164 ArfGAP_dom 503 644
IPR002110 Ankyrin_rpt 750 813
IPR001849 PH_domain 294 425
No external refs found!