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  4. Sequence
  5. Ala_g02435

Ala_g02435


Description : not classified & original description: none


Gene families : OG0001047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02435

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00099p00056810 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00169p00047130 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G33680 No alias KH domain-containing protein 0.03 OrthoFinder output from all 47 species
AT2G25970 No alias KH domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g077319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32757 No alias virus infection resistance factor *(BTR1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g08425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008730 No alias not classified & original description: CDS=100-2877 0.04 OrthoFinder output from all 47 species
Cba_g72682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G027700.1 Ceric.03G027700 not classified & original description: pacid=50573278... 0.04 OrthoFinder output from all 47 species
Ceric.20G036400.1 Ceric.20G036400 not classified & original description: pacid=50567078... 0.03 OrthoFinder output from all 47 species
Cre06.g250800 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g48457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036378001 No alias No description available 0.07 OrthoFinder output from all 47 species
Lfl_g02045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10191 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp3g07780.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g17404 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g26146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc11g040370.2.1 Solyc11g040370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g07318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01119 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e014452_P001 Zm00001e014452 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 244 312
IPR004088 KH_dom_type_1 153 218
No external refs found!