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  5. Ala_g02358

Ala_g02358


Description : substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(SAGL1) & original description: none


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g02358

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene56749.t1 Aspi01Gene56749 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Cba_g09527 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g08863 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g19058 No alias substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Smo83069 No alias F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 68 102
IPR006652 Kelch_1 160 200
IPR006652 Kelch_1 203 250
No external refs found!