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  5. Ala_g01990

Ala_g01990 (FBX2)


Aliases : FBX2

Description : substrate adaptor *(FBX2) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0005464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g01990

Target Alias Description ECC score Gene Family Method Actions
Sam_g24790 No alias substrate adaptor *(FBX2) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Tin_g02714 FBX2 substrate adaptor *(FBX2) of SCF E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 136 167
IPR001680 WD40_repeat 227 258
IPR001680 WD40_repeat 309 338
IPR001810 F-box_dom 45 84
No external refs found!