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  5. Ala_g01988

Ala_g01988


Description : substrate adaptor of SCF E3 ubiquitin ligase *(AFR) & original description: none


Gene families : OG0004179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g01988

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035518001 AFR F-box protein AFR OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os07g05880.1 LOC_Os07g05880 F-box/kelch-repeat protein At1g30090 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g20815 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.03 OrthoFinder output from all 47 species
Smo55890 No alias F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 231 277
IPR001810 F-box_dom 92 128
No external refs found!