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  5. Ala_g01174

Ala_g01174


Description : beta-type-5 component *(PBE) of 26S proteasome & original description: none


Gene families : OG0004761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g01174

Target Alias Description ECC score Gene Family Method Actions
AT1G13060 PBE1 20S proteasome beta subunit E1 0.04 OrthoFinder output from all 47 species
Aob_g07705 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000499 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.28G031800.1 Ceric.28G031800 beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.44 No alias Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Cre10.g461950 No alias Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
LOC_Os06g06030.1 LOC_Os06g06030 component beta type-5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Lfl_g12238 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
MA_2177g0010 PBE1 component beta type-5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Msp_g07676 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Nbi_g43610 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Sam_g14103 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Solyc05g056160.3.1 Solyc05g056160 component beta type-5 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Tin_g02565 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Zm00001e036472_P001 Zm00001e036472 component beta type-5 of 26S proteasome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 59 239
No external refs found!