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  5. Ala_g00891

Ala_g00891


Description : calcium sensor *(CML) & original description: none


Gene families : OG0002864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g00891

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00195030 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML49 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G04170 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
Als_g08839 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00817 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g04240.1 LOC_Os12g04240 no description available(sp|q2qy10|cbp_orysj : 362.0) 0.04 OrthoFinder output from all 47 species
Lfl_g19633 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 101 122
IPR002048 EF_hand_dom 164 193
No external refs found!