Msp_g48877

Description : regulatory protein *(ISTL) of ESCRT-mediated sorting & original description: none

Gene families : OG0000406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g48877

Target	Alias	Description	ECC score	Gene Family Method
AT1G13340	No alias	Regulator of Vps4 activity in the MVB pathway protein	0.03	OrthoFinder output from all 47 species
Ceric.04G112400.1	Ceric.04G112400	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.03	OrthoFinder output from all 47 species
Cre10.g435400	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dcu_g01980	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.03	OrthoFinder output from all 47 species
GSVIVT01015242001	No alias	No description available	0.02	OrthoFinder output from all 47 species
LOC_Os01g49350.1	LOC_Os01g49350	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os08g07830.1	LOC_Os08g07830	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp3g09120.1	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Pir_g08433	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023198	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Sam_g07325	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Sam_g07326	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g29854	No alias	regulatory protein *(ISTL) of ESCRT-mediated sorting &...	0.02	OrthoFinder output from all 47 species
Smo66879	No alias	No description available	0.02	OrthoFinder output from all 47 species
Solyc04g007230.3.1	Solyc04g007230	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Solyc04g072560.3.1	Solyc04g072560	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Solyc06g066690.4.1	Solyc06g066690	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e021674_P001	Zm00001e021674	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006771	riboflavin metabolic process	IEP	HCCA
BP	GO:0006914	autophagy	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0008703	5-amino-6-(5-phosphoribosylamino)uracil reductase activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009231	riboflavin biosynthetic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042726	flavin-containing compound metabolic process	IEP	HCCA
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005061	Ist1	15	179

External Links

No external refs found!

Msp_g48877

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation