Msp_g48582


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g48582

Target Alias Description ECC score Gene Family Method Actions
Adi_g002453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g012573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018230 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g018518 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g045649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02274 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g02562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07952 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04431 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05733 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06077 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06166 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18752 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30421 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30586 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30870 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32527 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55301 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008664 No alias not classified & original description: CDS=1-3960 0.04 OrthoFinder output from all 47 species
Azfi_s0084.g038899 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2004 0.05 OrthoFinder output from all 47 species
Azfi_s0090.g042638 No alias not classified & original description: CDS=1-2115 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.03 OrthoFinder output from all 47 species
Azfi_s0144.g051561 No alias not classified & original description: CDS=1-3123 0.04 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0451.g070770 No alias not classified & original description: CDS=1-2109 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Cba_g05296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07618 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19873 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g44526 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67449 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75131 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75387 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G085500.1 CRR22, Ceric.01G085500 not classified & original description: pacid=50592662... 0.03 OrthoFinder output from all 47 species
Ceric.10G025600.1 Ceric.10G025600 not classified & original description: pacid=50611862... 0.03 OrthoFinder output from all 47 species
Ceric.14G076500.1 Ceric.14G076500 not classified & original description: pacid=50633826... 0.04 OrthoFinder output from all 47 species
Ceric.19G039900.1 Ceric.19G039900 not classified & original description: pacid=50575946... 0.03 OrthoFinder output from all 47 species
Ceric.21G062900.1 Ceric.21G062900 not classified & original description: pacid=50604156... 0.07 OrthoFinder output from all 47 species
Ceric.23G005700.1 Ceric.23G005700 not classified & original description: pacid=50611427... 0.03 OrthoFinder output from all 47 species
Ceric.33G035100.1 Ceric.33G035100 not classified & original description: pacid=50606945... 0.04 OrthoFinder output from all 47 species
Ceric.34G015500.1 OTP84, Ceric.34G015500 not classified & original description: pacid=50623596... 0.04 OrthoFinder output from all 47 species
Ceric.36G038100.1 Ceric.36G038100 not classified & original description: pacid=50568680... 0.04 OrthoFinder output from all 47 species
Ceric.37G017500.1 VAC1, ECB2,... ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.03 OrthoFinder output from all 47 species
Dac_g13741 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14985 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g31479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06991 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19629 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g19876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g29919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g58364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48641 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09624 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g10135 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19389 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28692 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g30268 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39215 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g43649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63291 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02232 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13365 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15092 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18662 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000390 No alias not classified & original description: CDS=1-1221 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003526 No alias not classified & original description: CDS=1-2562 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0202.g025642 No alias not classified & original description: CDS=1-1872 0.03 OrthoFinder output from all 47 species
Sam_g17285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18575 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18788 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56098 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40520 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g41036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP HCCA
BP GO:0000492 box C/D snoRNP assembly IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 425 473
IPR002885 Pentatricopeptide_repeat 505 526
IPR002885 Pentatricopeptide_repeat 211 240
IPR002885 Pentatricopeptide_repeat 65 89
IPR002885 Pentatricopeptide_repeat 181 208
IPR002885 Pentatricopeptide_repeat 326 372
IPR002885 Pentatricopeptide_repeat 91 138
No external refs found!