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  5. Msp_g48399

Msp_g48399


Description : not classified & original description: none


Gene families : OG0000771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000771_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g48399

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00142400 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g23648 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_23866g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g60384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g122300.3.1 Solyc03g122300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g054130.1.1 Solyc06g054130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g066530.1.1 Solyc06g066530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g46414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012322_P001 Zm00001e012322 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 306 401
No external refs found!