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Aliases : TCP3
Description : TCP-type transcription factor & original description: none
Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g48155 | |
| Cluster | HCCA: Cluster_48 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00154p00072430 | TCP13, TFPD,... | RNA biosynthesis.transcriptional activation.TCP... | 0.05 | OrthoFinder output from all 47 species | |
| AT3G02150 | TCP13, TFPD, PTF1 | plastid transcription factor 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G15030 | TCP4, MEE35 | TCP family transcription factor 4 | 0.01 | OrthoFinder output from all 47 species | |
| AT5G60970 | TCP5 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07745 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07892 | TCP3 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g04833 | TCP10 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g18903 | TCP3 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g30172 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene27741.t1 | TCP2, Aspi01Gene27741 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene50266.t1 | TCP2, Aspi01Gene50266 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g22010 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g37950 | TCP13, TFPD, PTF1 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G064100.1 | ATTCP24, TCP24,... | TCP-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008109001 | TCP5 | RNA biosynthesis.transcriptional activation.TCP... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g24480.1 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| MA_101752g0020 | ATTCP24, TCP24 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_12784g0010 | ATTCP24, TCP24 | transcription factor (TCP) | 0.01 | OrthoFinder output from all 47 species | |
| MA_3891g0010 | TCP13, TFPD, PTF1 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| MA_547683g0010 | TCP2 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_86651g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Mp1g19590.1 | TCP3 | transcription factor (TCP) | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g27318 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g20245 | TCP3 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g26727 | TCP13, TFPD, PTF1 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g02212 | TCP3 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo89227 | TCP2 | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g089830.2.1 | TCP1, Solyc02g089830 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g006980.1.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g009900.3.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g053410.4.1 | TCP4, MEE35,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g048370.4.1 | TCP2, Solyc08g048370 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g32343 | TCP3 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011516_P001 | TCP2, Zm00001e011516 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011911_P001 | ATTCP24, TCP24,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019734_P001 | TCP5, Zm00001e019734 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004097 | catechol oxidase activity | IEP | HCCA |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| MF | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006887 | exocytosis | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015858 | nucleoside transport | IEP | HCCA |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
| MF | GO:0016843 | amine-lyase activity | IEP | HCCA |
| MF | GO:0016844 | strictosidine synthase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032940 | secretion by cell | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046903 | secretion | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:0140352 | export from cell | IEP | HCCA |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | HCCA |
| MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | HCCA |
| MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 201 | 330 |
| No external refs found! |