Msp_g44939


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g44939

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00026790 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Ala_g35740 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g66074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009157001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01017725001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031228001 No alias No description available 0.02 OrthoFinder output from all 47 species
Len_g45490 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022828 No alias not classified & original description: CDS=181-576 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 61 222
No external refs found!