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  5. Msp_g44780

Msp_g44780


Description : not classified & original description: none


Gene families : OG0000960 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000960_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g44780

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00253560 evm_27.TU.AmTr_v1... Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
AMTR_s00016p00253590 evm_27.TU.AmTr_v1... Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
AT1G47980 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
Aev_g26650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31936 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Aop_g69430 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aspi01Gene09413.t1 Aspi01Gene09413 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008071 No alias not classified & original description: CDS=1-903 0.06 OrthoFinder output from all 47 species
Azfi_s0038.g026236 No alias not classified & original description: CDS=1-975 0.03 OrthoFinder output from all 47 species
Ceric.19G026400.1 Ceric.19G026400 not classified & original description: pacid=50575499... 0.04 OrthoFinder output from all 47 species
Ceric.19G026500.1 Ceric.19G026500 not classified & original description: pacid=50575626... 0.02 OrthoFinder output from all 47 species
Ceric.19G027300.1 Ceric.19G027300 not classified & original description: pacid=50576564... 0.07 OrthoFinder output from all 47 species
Dde_g46974 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
GSVIVT01035573001 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
Gb_11266 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Gb_15806 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.05 OrthoFinder output from all 47 species
Gb_32514 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
LOC_Os05g05920.1 LOC_Os05g05920 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
Len_g57690 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
MA_10432841g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 OrthoFinder output from all 47 species
MA_276729g0010 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.06 OrthoFinder output from all 47 species
Mp6g16310.1 No alias Desiccation-related protein PCC13-62 OS=Craterostigma... 0.02 OrthoFinder output from all 47 species
Msp_g12800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09420 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Solyc01g099530.3.1 Solyc01g099530 Pentatricopeptide repeat-containing protein At5g14770,... 0.06 OrthoFinder output from all 47 species
Solyc01g099570.4.1 Solyc01g099570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g014310.3.1 Solyc09g014310 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.04 OrthoFinder output from all 47 species
Spa_g46655 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g46656 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g44830 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e001638_P001 Zm00001e001638 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Zm00001e029735_P001 Zm00001e029735 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species
Zm00001e040816_P001 Zm00001e040816 Desiccation-related protein PCC13-62 OS=Craterostigma... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA

No InterPro domains available for this sequence

No external refs found!