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  5. Msp_g44059

Msp_g44059


Description : not classified & original description: none


Gene families : OG0003133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g44059
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Adi_g129698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14431 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g40010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.18G056000.1 Ceric.18G056000 not classified & original description: pacid=50621558... 0.02 OrthoFinder output from all 47 species
Dac_g17785 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g31248 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13894 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11597 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g19522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24623 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g06717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_40006 No alias Senescence/dehydration-associated protein At4g35985,... 0.02 OrthoFinder output from all 47 species
Len_g29905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31004 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009686 Senescence/spartin_C 157 265
No external refs found!