Msp_g44006 (GNC, GATA21)

Aliases : GNC, GATA21

Description : transcription factor *(A/B-GATA) & original description: none

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g44006

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00064p00107710	GATA22, CGA1,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
Adi_g016252	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g021303	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g022369	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g035600	GATA5	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g058312	GATA4	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g14739	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.06	OrthoFinder output from all 47 species
Aob_g01872	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0087.g042307	GNC, GATA21	transcription factor *(A/B-GATA) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.02G072900.1	GATA17, Ceric.02G072900	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Dcu_g12986	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g20096	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Len_g13378	GATA15	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
MA_14038g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021913	GATA15	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Solyc12g008830.3.1	GNC, GATA21,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Tin_g20099	GATA15	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e037876_P002	GATA4, Zm00001e037876	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0009975	cyclase activity	IEP	HCCA
MF	GO:0009976	tocopherol cyclase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	258	291

External Links

No external refs found!

Msp_g44006 (GNC, GATA21)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation