1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g44003

Msp_g44003 (QRT3)


Aliases : QRT3

Description : polygalacturonase *(QRT3) & original description: none


Gene families : OG0004265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004265_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g44003
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00255270 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00102p00131940 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.03 OrthoFinder output from all 47 species
AT4G20050 QRT3 Pectin lyase-like superfamily protein 0.07 OrthoFinder output from all 47 species
Aop_g67503 QRT3 polygalacturonase *(QRT3) & original description: none 0.16 OrthoFinder output from all 47 species
Azfi_s0006.g010377 QRT3 polygalacturonase *(QRT3) & original description: CDS=62-1624 0.08 OrthoFinder output from all 47 species
Ceric.15G061400.1 QRT3, Ceric.15G061400 polygalacturonase *(QRT3) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.21G028400.1 QRT3, Ceric.21G028400 polygalacturonase *(QRT3) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g16097 QRT3 polygalacturonase *(QRT3) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g31759 QRT3 polygalacturonase *(QRT3) & original description: none 0.13 OrthoFinder output from all 47 species
GSVIVT01012139001 QRT3 Cell wall.pectin.modification and... 0.05 OrthoFinder output from all 47 species
Len_g58007 QRT3 polygalacturonase *(QRT3) & original description: none 0.12 OrthoFinder output from all 47 species
Len_g58008 QRT3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10425986g0010 QRT3 polygalacturonase (QRT3) 0.02 OrthoFinder output from all 47 species
MA_10425986g0020 QRT3 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species
MA_23603g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_917578g0010 QRT3 polygalacturonase (QRT3) 0.07 OrthoFinder output from all 47 species
Nbi_g29972 QRT3 polygalacturonase *(QRT3) & original description: none 0.13 OrthoFinder output from all 47 species
Ore_g26325 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13886 QRT3 polygalacturonase *(QRT3) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g40884 No alias polygalacturonase *(QRT3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g068400.3.1 QRT3, Solyc02g068400 polygalacturonase (QRT3) 0.06 OrthoFinder output from all 47 species
Spa_g33866 QRT3 polygalacturonase *(QRT3) & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g43106 QRT3 polygalacturonase *(QRT3) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44469 QRT3 polygalacturonase *(QRT3) & original description: none 0.12 OrthoFinder output from all 47 species
Zm00001e006958_P005 QRT3, Zm00001e006958 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!