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  5. Msp_g43675

Msp_g43675


Description : not classified & original description: none


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g43675
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT3G48940 No alias Remorin family protein 0.02 OrthoFinder output from all 47 species
Adi_g009108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g50861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70234 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Azfi_s0129.g048972 No alias not classified & original description: CDS=564-1205 0.03 OrthoFinder output from all 47 species
Azfi_s0217.g058560 No alias not classified & original description: CDS=1-231 0.04 OrthoFinder output from all 47 species
Ceric.04G101900.1 Ceric.04G101900 not classified & original description: pacid=50631891... 0.04 OrthoFinder output from all 47 species
Ceric.06G045700.1 Ceric.06G045700 not classified & original description: pacid=50619672... 0.12 OrthoFinder output from all 47 species
Ceric.11G018300.1 Ceric.11G018300 not classified & original description: pacid=50595329... 0.03 OrthoFinder output from all 47 species
Ceric.14G035300.1 Ceric.14G035300 not classified & original description: pacid=50633681... 0.05 OrthoFinder output from all 47 species
Ceric.35G046700.1 Ceric.35G046700 not classified & original description: pacid=50581722... 0.04 OrthoFinder output from all 47 species
Dcu_g42996 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g48279 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.06 OrthoFinder output from all 47 species
LOC_Os10g36000.1 LOC_Os10g36000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g01012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08631 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g57392 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g05160 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g16515 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Pnu_g06625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08904 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005937 No alias not classified & original description: CDS=1-372 0.05 OrthoFinder output from all 47 species
Sam_g20100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48237 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc10g017540.4.1 Solyc10g017540 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 95.1) 0.02 OrthoFinder output from all 47 species
Spa_g16772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38180 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001897 cytolysis by symbiont of host cells IEP HCCA
BP GO:0001907 killing by symbiont of host cells IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019836 hemolysis by symbiont of host erythrocytes IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 115 224
No external refs found!