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Msp_g43146 (AGO1)


Aliases : AGO1

Description : not classified & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g43146
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene19810.t1 AGO7, ZIP,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01026264001 AGO2 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
Ore_g16802 AGO5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007503 AGO1 not classified & original description: CDS=68-2746 0.03 OrthoFinder output from all 47 species
Zm00001e016179_P001 PNH, AGO10, ZLL,... Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR032474 Argonaute_N 157 282
IPR003100 PAZ_dom 365 466
IPR032472 ArgoL2 500 531
IPR003165 Piwi 639 938
IPR014811 ArgoL1 293 341
No external refs found!