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  5. Msp_g42756

Msp_g42756


Description : not classified & original description: none


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g42756
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00088750 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G01320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g071573 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g15019 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61689.t1 Aspi01Gene61689 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g34188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os04g55230.1 LOC_Os04g55230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
LOC_Os07g23990.1 LOC_Os07g23990 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 OrthoFinder output from all 47 species
Lfl_g03522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g068230.4.1 Solyc06g068230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.04 OrthoFinder output from all 47 species
Spa_g55654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016102_P002 Zm00001e016102 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR028275 CLU_N 48 118
IPR033646 CLU-central 783 920
No external refs found!