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  5. Msp_g42297

Msp_g42297


Description : regulatory protein *(CBP60) of systemic acquired resistance & original description: none


Gene families : OG0000494 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000494_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g42297
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene54819.t1 Aspi01Gene54819 regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
Ceric.12G041000.1 Ceric.12G041000 regulatory protein *(CBP60) of systemic acquired... 0.03 OrthoFinder output from all 47 species
LOC_Os12g36910.1 LOC_Os12g36910 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g14501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39358 No alias regulatory protein *(CBP60) of systemic acquired... 0.02 OrthoFinder output from all 47 species
Solyc10g009210.4.1 Solyc10g009210 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR046829 Calmod_bind_C 321 378
IPR046831 Calmodulin_bind_N 89 236
IPR046830 Calmod_bind_M 249 314
No external refs found!