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  5. Msp_g41404

Msp_g41404


Description : bHLH-type transcription factor & original description: none


Gene families : OG0005877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005877_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g41404
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00183690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT1G06170 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g69486 No alias bHLH-type transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Ceric.14G094900.1 Ceric.14G094900 bHLH-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Dcu_g43850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g51070.1 LOC_Os04g51070 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Len_g59537 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_1220g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Nbi_g30559 No alias bHLH-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g41320 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43808 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16733 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g081100.3.1 Solyc01g081100 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e025435_P001 Zm00001e025435 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 332 378
No external refs found!