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Aliases : EMB2758
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G74400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G53360 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G01030 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005606 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g022087 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g036802 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g058169 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g26450 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g19274 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30788 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g63296 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g06042 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g27896 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g34282 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03536 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g04619 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g14571 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g17754 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene00209.t1 | EMB2758, Aspi01Gene00209 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene28168.t1 | Aspi01Gene28168 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene50522.t1 | Aspi01Gene50522 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008858 | No alias | not classified & original description: CDS=1-2760 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011443 | No alias | not classified & original description: CDS=1-2145 | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.02G045800.1 | Ceric.02G045800 | not classified & original description: pacid=50584171... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.05G093000.1 | Ceric.05G093000 | not classified & original description: pacid=50577993... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.10G079400.1 | CRR22, Ceric.10G079400 | not classified & original description: pacid=50612332... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.36G059200.1 | OTP86, Ceric.36G059200 | not classified & original description: pacid=50568280... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.39G018000.1 | Ceric.39G018000 | not classified & original description: pacid=50583390... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001038.5 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g07318 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g10056 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g30474 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Dac_g35459 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g37361 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g04207 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g06677 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g07665 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g15725 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g15908 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g18756 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22354 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g46461 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g13325 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15996 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g23295 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24725 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g26389 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024588001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01033654001 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_36775 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g58980.1 | LOC_Os04g58980 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03753 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g13048 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17588 | OTP86 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g06187 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g14850 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g33055 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g36302 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g01336 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g04332 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g06342 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g23160 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g23222 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g27304 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28763 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g30310 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g15698 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g18027 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g27737 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g08923 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g09916 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g12671 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30445 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g37891 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g04990 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13050 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20470 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g37149 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63646 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63890 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g04077 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g31070 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g39723 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53362 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53371 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53952 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g55132 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g55608 | LPA66 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g61267 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g62370 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62422 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008413 | No alias | not classified & original description: CDS=1-1578 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0037.g011872 | No alias | not classified & original description: CDS=1-2532 | 0.04 | OrthoFinder output from all 47 species | |
| Smo99677 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g062820.1.1 | Solyc07g062820 | RNA editing factor (SEL1/PDM1) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24963 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g55549 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g56147 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06583 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g23468 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e013166_P001 | Zm00001e013166 | Pentatricopeptide repeat-containing protein At4g14820... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 415 | 437 |
| IPR002885 | Pentatricopeptide_repeat | 313 | 337 |
| IPR002885 | Pentatricopeptide_repeat | 211 | 231 |
| IPR046848 | E_motif | 559 | 603 |
| IPR002885 | Pentatricopeptide_repeat | 339 | 385 |
| IPR002885 | Pentatricopeptide_repeat | 237 | 283 |
| IPR002885 | Pentatricopeptide_repeat | 137 | 181 |
| IPR002885 | Pentatricopeptide_repeat | 441 | 488 |
| No external refs found! |