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  5. Msp_g38908

Msp_g38908


Description : not classified & original description: none


Gene families : OG0000290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g38908
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00261310 evm_27.TU.AmTr_v1... C2 domain-containing protein At1g63220 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g051241 SRC2, (AT)SRC2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37958 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12863 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000903.14 NTMC2T5.1, NTMC2TYPE5.1 No description available 0.01 OrthoFinder output from all 47 species
Dde_g48949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002379 AGD13 class tau glutathione S-transferase & original... 0.04 OrthoFinder output from all 47 species
Solyc10g017480.1.1 Solyc10g017480 Elicitor-responsive protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Solyc10g018035.1.1 Solyc10g018035 Elicitor-responsive protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Spa_g18382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 83 173
IPR000008 C2_dom 209 302
No external refs found!