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  5. Msp_g38383

Msp_g38383


Description : not classified & original description: none


Gene families : OG0000108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g38383
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Aev_g18940 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19961.t1 Aspi01Gene19961 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35068.t1 Aspi01Gene35068 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene51960.t1 Aspi01Gene51960 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55719.t1 Aspi01Gene55719 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g78562 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27673 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR029472 Copia-like_N 2 38
No external refs found!