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  5. Msp_g38296

Msp_g38296 (CHUP1)


Aliases : CHUP1

Description : motility factor *(CHUP) & original description: none


Gene families : OG0001103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g38296
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00127710 evm_27.TU.AmTr_v1... Protein CHUP1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aob_g16074 CHUP1 motility factor *(CHUP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05298 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g46340.1 LOC_Os01g46340 regulatory protein (IPGA) of cortical microtubule organisation 0.03 OrthoFinder output from all 47 species
MA_211108g0010 CHUP1 regulatory protein (IPGA) of cortical microtubule organisation 0.03 OrthoFinder output from all 47 species
Pnu_g06491 CHUP1 motility factor *(CHUP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39670 CHUP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020303_P001 Zm00001e020303 regulatory protein (IPGA) of cortical microtubule organisation 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!