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  5. Msp_g38035

Msp_g38035


Description : not classified & original description: none


Gene families : OG0000491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g38035

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00175790 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00095p00177830 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G41010 CAMBP25, ATCAMBP25 calmodulin (CAM)-binding protein of 25 kDa 0.02 OrthoFinder output from all 47 species
AT3G22160 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
AT4G15120 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
AT5G65170 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g007487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g037220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G036400.1 Ceric.16G036400 not classified & original description: pacid=50589400... 0.03 OrthoFinder output from all 47 species
GSVIVT01005871001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os02g07690.1 LOC_Os02g07690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g31660.1 LOC_Os08g31660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_1753756g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_474373g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_49336g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_65398g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_77606g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g10663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g031990.1.1 Solyc02g031990 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g03149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07750 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g13757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013751_P001 Zm00001e013751 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e017385_P001 Zm00001e017385 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025135_P001 Zm00001e025135 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037746_P001 Zm00001e037746 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 160 183
No external refs found!