Msp_g37856


Description : component *(eS19) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000873 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000873_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g37856
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00207750 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s00110p00069670 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
AT5G61170 No alias Ribosomal protein S19e family protein 0.03 OrthoFinder output from all 47 species
Ala_g20886 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Aop_g00927 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g14490 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021017.6 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Cre02.g106600 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dac_g02533 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01012199001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
LOC_Os03g31090.1 LOC_Os03g31090 component RPS19 of SSU proteome 0.03 OrthoFinder output from all 47 species
Lfl_g15415 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
MA_10427917g0010 No alias component RPS19 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp1g27380.1 No alias component RPS19 of SSU proteome 0.04 OrthoFinder output from all 47 species
Pp3c14_19640V3.1 Pp3c14_19640 Ribosomal protein S19e family protein 0.03 OrthoFinder output from all 47 species
Pp3c17_15200V3.1 Pp3c17_15200 Ribosomal protein S19e family protein 0.01 OrthoFinder output from all 47 species
Pp3c1_28780V3.1 Pp3c1_28780 Ribosomal protein S19e family protein 0.01 OrthoFinder output from all 47 species
Pp3c2_10060V3.1 Pp3c2_10060 Ribosomal protein S19e family protein 0.01 OrthoFinder output from all 47 species
Sam_g22603 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g31814 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g41631 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Solyc12g039120.2.1 Solyc12g039120 component RPS19 of SSU proteome 0.04 OrthoFinder output from all 47 species
Spa_g11663 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g41565 No alias component *(eS19) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e002011_P001 Zm00001e002011 component RPS19 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e038053_P003 Zm00001e038053 component RPS19 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR001266 Ribosomal_S19e 1 131
No external refs found!